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Species belonging to selected taxon:

Medicago sativa



ABOUT THIS RECORD

ID: MNEST001540
species: Medicago sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Medicago sativa Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATACTACCTCCGTCCCTAATT

miRNA*
TTANGGACNGAGGTAGTATCA

mismatches: 3
bulges: 0

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pre-miRNA
ACGTTAAGAAGATACTACCTCCGTCCCTAATTATAAGACCCTTTTGAGAATTTTTTTTGTCCCTTTTTATAAGACCCCTTTGCTATTTCCAACTACATTA
ATTATTTCTTTACATACATGCCCCTTTTTATTATACATCTTTTTCTTCAATAAGCAATAAATAACATGTTGAAAACATAAACCAACCCTCTCTCTNNNGG
ATAAAATTGTAAAACCAATANTAATTACAAACATATTTAATACAAAATCCNCTATCTTAATTNCNNNTATTTTTNNAANGNTNCNATATTANGGACNGAG
GTAGTATCA
TGTATGAG


dot-bracket secondary structure
..........(((((((((((.((((.((((...((((.....((((((.....((((((....((.(((.(((....((((...(((.((((....(((
.(((((.(((.........................................))).))))).)))...)))).)))..)))).......))).(((...))
).....((((((............))))))..)))...)).)))))).......)))))).........))))..............)))).)))).)))
)))))))).
........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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